FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753731

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753731
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67122159
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG115350.05.958698345-49
ACACGTC486000.05.8021874145
ATCGGAA725750.05.7832227145
CGTCTGA438350.05.6556625145
TAGATCG277450.05.6173587145
GATCGGA718350.05.499698145
AGATCGG745900.05.471497145
CGGAAGA725300.05.267097145
TCGGAAG721600.05.1434183145
Produced by FastQC (version 0.11.5)