FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753733

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753733
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67077062
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG119250.06.10381745-49
GATCGGA764200.06.051928145
ACACGTC515150.05.8256817145
AGATCGG790250.05.6414495145
TCGGAAG767450.05.4879145
CGTCTGA464900.05.3482866145
ACGTCTG531000.05.324149145
CGTATGC144300.05.16479345-49
ATCGGAA765000.05.158741140-144
CACGTCT574900.05.081511145
CACACGT668750.05.0729685145
TAGATCG304500.05.02314145
CGGAAGA765150.05.0022736145
Produced by FastQC (version 0.11.5)