FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753738

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753738
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68272897
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCGTG511950.06.3418837145
GCGTCGG57700.06.1544333145
TCGTGTA508100.05.505616145
GTCGTGT525500.05.475018145
GCGTCGT521900.05.315036140-144
AGCGTCG558350.05.191404140-144
GAGCGTC636100.05.1269145
TAGATCG323200.05.0003605145
Produced by FastQC (version 0.11.5)