FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753739

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753739
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67670392
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA757700.05.7213864145
TATGCCG124650.05.699451445-49
GATCGGA753650.05.694419145
ACACGTC506750.05.6077642145
AGATCGG780200.05.547097145
TCGGAAG749650.05.4830465145
ACGTCTG518750.05.478042145
CGGAAGA748800.05.4118204145
CGTCTGA459550.05.035482140-144
Produced by FastQC (version 0.11.5)