FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753744

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753744
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67890026
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG56650.06.7826633145
AGCGTCG551550.05.9412503145
CGTCGTG502350.05.628368145
GAGCGTC623950.05.30907739
GATCGGA825300.05.26186145
AGATCGG858450.05.2529063145
CGTGTAG516800.05.246545145
GCGTCGT508950.05.1621175140-144
GTCGTGT520350.05.1132236145
ATCGGAA822800.05.0840034145
Produced by FastQC (version 0.11.5)