FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753760

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753760
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66263501
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG54400.09.728665145
GCGTCGT667350.05.866369145
GAGCGTC796350.05.8436479
CGTGTAG650950.05.724595145
CGTCGTG648000.05.594023145
AGATCGG1109850.05.5720377145
AGAGCGT871300.05.44911348
AAGAGCG977900.05.4416537145
AGCGTCG717800.05.4338555145
GATCGGA1075650.05.41894145
ATCGGAA1066550.05.417593145
GTCGTGT659400.05.4093547145
TCGTGTA638850.05.401786145
CGCCGTA179500.05.371421345-49
Produced by FastQC (version 0.11.5)