FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753768

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753768
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62555497
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGCGC176600.011.2496661
CCTTCGT243050.011.246711
CTTCGTT275400.09.7933982
TCGTTGG349050.08.7035024
TTCGTTG398200.08.6488823
CGTTGGA360050.08.5986995
ACCGTGC194750.08.0790821
CCGCGCC270150.07.6488182
AACGCGA47350.06.73771241
CGAAGAT166700.06.6541543145
GGAAACG455300.06.38554579
CCCGTCT465500.06.35506871
CGCGAGT47150.06.30477763
ACTGCGC185600.06.28966761
CGCGCCC222050.06.23663333
CGCGATC103800.06.14685443
GCGCGAT103600.06.0185672
ACGCGAG50900.05.98254442
CCGTGCC244550.05.89983462
CGCGCCT120900.05.87715773
Produced by FastQC (version 0.11.5)