FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753770

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753770
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62982835
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGCGC177700.011.263551
CCTTCGT244550.010.6161991
CTTCGTT276300.08.8430772
TCGTTGG350450.08.0487394
CGTTGGA359250.07.9323185
TTCGTTG394150.07.83704663
CCGCGCC269500.07.5058482
ACCGTGC199500.07.12470341
AACGCGA43550.06.66078571
CCCGTCT465550.06.60470061
CGCGCCC225750.06.48825553
ACTGCGC188650.06.34279631
GGAAACG465900.06.17848639
CGCGATC103900.06.1414573
CGCGAGT44500.06.02901033
CGAAGAT171350.05.7630033145
CCGTGCC251950.05.6114432
CGTCTCT482950.05.6002963
GCGCGAT106250.05.5272672
ACGCGAG48551.8189894E-125.52543932
Produced by FastQC (version 0.11.5)