FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005753827

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753827
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60123449
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA247950.011.0642851
TCGGAAG269300.010.3650152
CGGAAGA296850.09.4763313
ACCGCGC147350.06.1237531
TATGCCG114950.05.663861345-49
CTCGTAT118850.05.17277940-44
TCTCGTA122450.05.13911440-44
Produced by FastQC (version 0.11.5)