FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753866

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753866
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54405422
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG363700.06.3384469
GAGCGTC408900.05.81508068
GCGTCGG55400.05.3658357145
AGAGCGT455250.05.20711047
ATCGGAA468800.05.1030491
Produced by FastQC (version 0.11.5)