FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753889

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753889
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences87738788
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA378450.011.50976851
TCGGAAG407300.010.591182
CGGAAGA457700.09.5674863
TATGCCG176350.06.347500345-49
CTCGTAT182850.05.71751540-44
CGTATGC205800.05.60129940-44
TCTCGTA188800.05.40676740-44
TGCCGTC225150.05.325917745-49
AGAGCAC944200.05.16777377
ATGCCGT225500.05.156900445-49
TCGTATG216950.05.02603140-44
Produced by FastQC (version 0.11.5)