FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753896

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753896
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86672411
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG462750.09.9172919
GAGCGTC530200.08.751388
ATCGGAA620150.08.3133581
TCGGAAG651200.07.8835632
AGAGCGT600350.07.77708537
CGGAAGA702250.07.4127873
AAGAGCG730200.07.13875686
Produced by FastQC (version 0.11.5)