FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753897

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753897
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences88213748
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA394850.012.998881
TCGGAAG416400.012.3783782
CGGAAGA462750.011.169863
TATGCCG184700.06.947755345-49
CTCGTAT190050.06.29443540-44
CGTATGC212650.06.29371340-44
TCTCGTA200150.05.984048440-44
AGAGCAC956250.05.8298797
ATGCCGT230700.05.694410345-49
TCGTATG218100.05.59792540-44
TGCCGTC236450.05.574330345-49
AGCACAC1019850.05.530299
GAGCACA1057500.05.5116338
GCCGTCT245050.05.479291445-49
GAAGAGC1073250.05.3834675
Produced by FastQC (version 0.11.5)