FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753901

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753901
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86475680
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA390700.013.2596431
TCGGAAG420150.012.3234392
CGGAAGA463550.011.1532993
TATGCCG185600.07.00798445-49
CTCGTAT185850.06.506786340-44
TCTCGTA194750.06.19453740-44
CGTATGC213550.06.11091140-44
AGAGCAC955150.06.07944067
AGCACAC1009200.05.8544099
ATGCCGT233400.05.827477545-49
TGCCGTC234650.05.75935745-49
GAGCACA1032900.05.713068
TCGTATG223750.05.68976740-44
GCCGTCT238050.05.58572845-49
GAAGAGC1060700.05.5223195
Produced by FastQC (version 0.11.5)