FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753906

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753906
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65715389
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGCGC176500.08.336081
ACCGTGC197500.07.19155361
AACGCGA34601.2551027E-106.10487941
CTCACGC522850.05.79283053
ACCGCAC174500.05.7602171
CCGCGCC271100.05.61449432
GCTCACG531150.05.58119252
ACTGCGC188000.05.03663731
Produced by FastQC (version 0.11.5)