FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753934

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753934
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82392585
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG573850.018.6000429
GAGCGTC678500.015.9020988
ATCGGAA684500.015.8677531
AGAGCGT697250.015.5056467
TCGGAAG761150.014.3905352
CGGAAGA792250.013.81100753
AAGAGCG839350.012.9755416
GAAGAGC1360750.08.3764495
GATCGGA588100.08.2905851
CGCCGTA402050.07.86530745-49
GCCGTAT417750.07.566241345-49
CGTATCA432950.07.39433245-49
CCGTATC447000.07.210547445-49
ACCGCGC384750.07.0716331
TGGTCGC515850.06.32119940-44
GTCGCCG523900.06.179810540-44
TCGTGTA518100.06.114717510-14
GCGTCGT527850.05.963333610-14
GTGGTCG550150.05.96133940-44
ACGCGAT40405.456968E-125.92127662
Produced by FastQC (version 0.11.5)