FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753964

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753964
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66912082
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG51850.010.6264305145
ACCGCGC173700.08.2886121
CGTCGTG420700.06.358819145
AGCGTCG461100.06.273362145
GCGTCGT427200.05.868329140-144
GAGCGTC535700.05.8598814145
TCGTGTA420850.05.8397593145
GATCGGA721250.05.739485145
GCGCGAT108200.05.69582752
CGCGATC107500.05.6654663
AGATCGG764050.05.664677145
TCGGAAG725300.05.537512145
CGTGTAG428100.05.4360366145
GTCGTGT437100.05.423624145
CGGAAGA731150.05.2453175145
TAGATCG288750.05.222326145
ATCGGAA722250.05.2196136145
AAGAGCG687900.05.2062407145
AGAGCGT598500.05.1844444145
CCGCGCC277450.05.0958312
Produced by FastQC (version 0.11.5)