FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753972

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753972
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62123262
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGCGC170300.012.9538981
CGCGATC107300.012.636933
CTCACGC524300.012.2118253
GCGCGAT108600.012.1523572
GCTCACG522850.011.8579052
GGCGCGA135100.010.5049941
ACCGCAC171950.09.6649611
TCACGCC674250.09.6464934
GCGATCT219350.09.6195184
ACGCCTG679300.09.61735256
CACGCCT700250.09.5782515
CCTTCGT224050.09.4523851
CGCCTGT729950.09.136137
ACTGCGC180950.08.8185061
ACCGTGC193650.08.7717921
CCGCGCC274600.08.3710072
TCGTTGG319750.08.1410774
GCGCAAT110000.08.0424082
TTCGTTG367650.07.81016733
CTTCGTT254900.07.7947052
Produced by FastQC (version 0.11.5)