FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753980

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753980
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62629435
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGCGC174150.013.866141
CGCGATC107250.013.315343
GCGCGAT107450.012.9647432
GCTCACG537400.010.6524242
CTCACGC531200.010.5897813
GCGTCGG43100.010.44698145
GGCGCGA136800.010.4404891
ACCGTGC195200.09.9947361
GCGATCT223950.09.5489364
CCGCGCC282300.08.5842952
CACGCCT697450.08.501965
ACGCCTG672900.08.3273226
ACCGCAC177450.08.2977291
TCACGCC689050.08.24801354
CCTTCGT216800.08.2179091
ACTGCGC176400.07.92976431
CGCCTGT734800.07.9020447
CTTCGTT250350.07.76705272
TCGTTGG326000.07.73830184
CGCGCCC241250.07.48195933
Produced by FastQC (version 0.11.5)