FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753989

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753989
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60652067
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGCGC153950.06.5957121
AGATCGG600300.06.287633145
GCGCGAT98300.06.20090442
TAGATCG236150.06.1474395145
ACACGTC384750.06.0936303145
CGCGATC96600.06.00332983
CGTCTGA342950.05.989738145
ATCGGAA572700.05.9315867145
GATCGGA571500.05.8170323145
CTCACGC477350.05.4365763
ACGTCTG400300.05.3854637145
CGGAAGA577900.05.3506813145
CACGTCT436400.05.3391542145
TCGGAAG571600.05.3207645145
GCTCACG488600.05.31690452
GGCGCGA118450.05.218031
Produced by FastQC (version 0.11.5)