FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753995

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753995
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63950322
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGCGC162800.08.0905471
TCGGAAG664850.06.1770673145
ATCGGAA668800.06.151434145
GATCGGA664850.06.046105145
AGATCGG701350.06.0418177145
CGGAAGA665150.06.0324693145
ACACGTC438200.05.9278917145
CGTCTGA387250.05.808445145
CGCGATC101900.05.69103963
ACGTCTG440850.05.6618347145
GCGCGAT101450.05.5795052
CCGCGCC238050.05.5787392
CACGTCT485850.05.451051145
GCACACG581000.05.282674145
TAGATCG273100.05.2239485140-144
Produced by FastQC (version 0.11.5)