FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754004

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754004
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56757232
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG61400.011.688696145
AGCGTCG716950.05.9859357145
TGGTCGC205100.05.938036145
CGTCGTG654150.05.895674145
CGTGTAG633950.05.591819145
TCGTGTA626750.05.5519576145
GTCGTGT659500.05.3971677145
GCGTCGT666300.05.394355140-144
GAGCGTC793300.05.3824134145
GATCGGA1066350.05.2346807145
AGATCGG1106550.05.129676145
TCGGAAG1044850.05.099559145
AAGAGCG950050.05.07428145
Produced by FastQC (version 0.11.5)