FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754008

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754008
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56263958
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG60150.012.7748575145
CGTCGTG648300.06.2394176145
AGCGTCG713550.06.05491145
CGTGTAG633450.05.8707137145
TCGTGTA621750.05.6197515145
CGCCGTA140900.05.5564656145
GCGTCGT659750.05.5047607140-144
GAGCGTC784300.05.4994674145
GATCGGA1050950.05.3595066145
GTCGTGT650500.05.239809140-144
TCGGAAG1027750.05.10666145
TAGATCG395500.05.022153145
ATCGGAA1038500.05.011916145
Produced by FastQC (version 0.11.5)