FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754009

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754009
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56203115
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCTCGG244350.06.9418435145
ACGCTCG231550.06.8559976145
GTCACGC315150.06.693403145
TCGGTAA215700.06.3852043145
CACGCTC323850.06.356906145
AGTCACG358100.06.194246145
CTCGTAT148800.06.040739145
GCTCGGT255700.06.0383763145
ACACGTC668550.05.9417996145
CGTCTGA591700.05.794699145
ACGTCTG653250.05.736968145
CTCGGTA225000.05.6702404145
TATGCCG121700.05.65854145
CGTATGC149350.05.4845943145
ATCTCGT196300.05.4283566145
CGGTAAT213900.05.415766140-144
AGATCGG1052800.05.411878145
GATCGGA1011200.05.397955145
TCGGAAG983550.05.3875613145
CACGTCT700000.05.3434653145
Produced by FastQC (version 0.11.5)