FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754018

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754018
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55611848
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG51550.011.391187145
CGTCGTG462800.06.140523145
AGCGTCG508700.06.0852547145
CGTGTAG464900.05.7073455145
GCGTCGT469550.05.607755140-144
GAGCGTC569400.05.5129375145
GTCGTGT471950.05.3763146145
TCGGAAG769550.05.322605145
TCGTGTA451900.05.2940035145
AGATCGG805050.05.2679987145
ATCGGAA769500.05.266424145
GATCGGA771800.05.12862145
Produced by FastQC (version 0.11.5)