FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754022

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754022
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55613026
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG53600.09.602307145
GTCGTGT479100.05.7798853145
CGTCGTG466050.05.7550783145
AGATCGG810100.05.6285176145
CGTGTAG467750.05.563687145
AGCGTCG511650.05.42635145
TCGTGTA453200.05.406408145
GCGTCGT475500.05.3937383140-144
GAGCGTC580450.05.370141145
ATCGGAA768800.05.34628145
CGGAAGA770350.05.1379113145
GATCGGA779100.05.1174254145
TAGATCG306700.05.1053085145
AGAGCGT637550.05.093846145
Produced by FastQC (version 0.11.5)