FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754036

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754036
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68831408
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG73950.012.449944145
CGTCGTG908800.06.3575797145
CGTGTAG869600.06.018933145
GTCGTGT908200.05.6832967145
AGCGTCG1002850.05.6240015145
GCGTCGT932700.05.619586140-144
TCGTGTA861750.05.392356145
GAGCGTC1094400.05.3920035145
GATCGGA1488350.05.2945166145
AAGAGCG1311450.05.207161145
GTCGCCG286200.05.065965145
TCGGAAG1443950.05.0205317145
CGCCGTA222400.05.01977445-49
Produced by FastQC (version 0.11.5)