FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754038

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754038
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67536381
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG73900.010.888337145
CGTCGTG856700.05.8385277145
AGCGTCG934800.05.8160157145
TCGTGTA815750.05.4740233145
ATCGGAA1364800.05.3964443145
CGTGTAG821500.05.365115145
GAGCGTC1026500.05.3458886145
GTCGTGT857000.05.2782116145
GCGTCGT872900.05.260143140-144
GATCGGA1385200.05.191373145
AGATCGG1425100.05.1681056145
TCGGAAG1344750.05.056433145
Produced by FastQC (version 0.11.5)