FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754045

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754045
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67484937
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG201900.06.414153645-49
ACACGTC931250.05.893796145
CGTCTGA830850.05.7420745145
ATCGGAA1413400.05.612001145
GCCGTCT239450.05.58290250-54
ACGTCTG912200.05.5558767145
TCGGAAG1383500.05.5498633145
CGTATGC238950.05.51672245-49
CACGTCT969950.05.4642878145
TGCCGTC238700.05.45466250-54
ATGCCGT243500.05.431504245-49
CTCGTAT228500.05.39921540-44
CGTCTTC261850.05.310188350-54
AGATCGG1471550.05.2818403145
CACACGT1109700.05.259638145
TCTCGTA245350.05.2010627145
GATCGGA1438850.05.1902375145
GCACACG1128950.05.105731145
TAGATCG542900.05.101631145
CCGTCTT271650.05.08659450-54
Produced by FastQC (version 0.11.5)