FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754046

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754046
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67484937
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG81450.018.600012145
CGTCGTG890400.05.942863145
CGCCGTA211150.05.85007945-49
AGCGTCG975700.05.7353373145
CGTGTAG851150.05.6207705145
GAGCGTC1073250.05.6062599
GTCGTGT886200.05.4720793145
ATCGGAA1444000.05.441518145
AGAGCGG201300.05.4373984145
TCGTGTA845800.05.4163585145
AAGAGCG1287650.05.3929405145
GCGTCGT907600.05.380043140-144
AGAGCGT1156200.05.29182538
GCCGTAT239000.05.28970945-49
TCGGAAG1420150.05.2470703145
TCGCCGT233750.05.222442645-49
TAGATCG539300.05.1747375145
CCGTATC250700.05.11223945-49
AGATCGG1507300.05.087963145
CGTATCA255350.05.087276545-49
Produced by FastQC (version 0.11.5)