FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754053

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754053
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54804132
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT642600.06.1375394145
ATCGGAA684400.05.9427705145
GATCGGA689350.05.8895802145
CGTCTGA410050.05.8699903145
ACGTCTG596600.05.772268145
ACACGTC455150.05.5272746145
CGGAAGA683600.05.514897145
AGATCGG720950.05.5007043145
TCGGAAG678900.05.4783235145
TCACGTC259350.05.339287145
GCACACG589350.05.2897024145
TAGATCG272250.05.272704145
GTCACGT247650.05.123135145
AGTCACG261400.05.020062145
Produced by FastQC (version 0.11.5)