FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754069

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754069
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56445068
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGGAAG618700.06.1755514145
ACACGTC408250.06.0558267145
ATCGGAA624950.06.0209823145
AGATCGG655400.05.9735503145
TAGATCG243050.05.96595145
CGTCTGA373800.05.7799244145
GATCGGA626250.05.719057145
CGTCTAA152850.05.549651145
ACGTCTG420100.05.4880705145
CGGAAGA624650.05.4087186145
GCACACG539850.05.089925145
CACGTCT454100.05.045228145
CACACGT550400.05.0187063145
Produced by FastQC (version 0.11.5)