FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754072

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754072
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56632827
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG56900.07.644058145
GATCGGA721950.05.8539157145
GTCGTGT429900.05.834366145
CGTCGTG416900.05.8076386145
AGCGTCG461050.05.8018084145
AGATCGG756700.05.7287846145
GAGCGTC527250.05.4720683145
AAGAGCG676150.05.403467145
TCGGAAG722450.05.328092145
GCGTCGT425100.05.3033986145
TCGTGTA409350.05.241818145
AGAGCGT587450.05.2198076145
ATCGGAA717150.05.080339140-144
Produced by FastQC (version 0.11.5)