FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754073

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754073
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56697259
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC423200.06.2690544145
AGATCGG683800.06.2014513145
TCGGAAG646300.06.0004835145
CGTCTGA380200.05.948522145
CGGAAGA648500.05.9465938145
GATCGGA652150.05.86885145
ATCGGAA647850.05.8071027145
ACGTCTG435150.05.7470727145
TAGATCG256400.05.512939145
CACGTCT472350.05.4172316145
GCACACG558300.05.1285677145
TATGCCG96550.05.060333345-49
CACACGT555000.05.041513145
Produced by FastQC (version 0.11.5)