FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754075

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754075
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56695104
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGGAAG654950.06.2092266145
ATCGGAA657000.06.2008853145
AGATCGG690750.06.0553284145
ACACGTC430050.05.984008145
CGTCTGA387550.05.9668584145
CCGTCTA177800.05.8302484145
GATCGGA657050.05.803234145
CACGTCT476400.05.5235415145
GCACACG565750.05.471244145
CGGAAGA657900.05.388051145
ACGTCTG443600.05.2946377145
TAGATCG263650.05.2240653145
CACTCCG227350.05.037846145
Produced by FastQC (version 0.11.5)