FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754080

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754080
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58263665
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCTCACG535200.010.6940352
CTCACGC524050.010.4743353
CGCGATC107100.010.3586993
GCGCGAT106250.010.1044692
GCGTCGG59150.09.810851145
CACGCCT713500.08.4640145
ACGCCTG693950.08.347266
TCACGCC690650.08.3151564
ACCGCGC183050.08.2493671
GGCGCGA142100.08.0473641
CGCCTGT754950.07.98965937
GCGATCT219300.07.5387524
ACCGCAC176100.07.49266431
CGCAATC115850.07.32306773
GCGCAAT110250.07.30340052
GGCTCAC1687550.06.66333771
CCTGTAA1988300.06.3948639
GGCGCAA132600.06.13624331
ACCGTGC196700.05.9999091
GCTCACA804400.05.93382262
Produced by FastQC (version 0.11.5)