FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754082

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754082
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57584929
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG61750.011.624796145
GCTCACG524200.010.336012
CTCACGC518550.010.308443
CGCGATC101500.09.5753553
ACCGCGC172650.09.3808671
GCGCGAT100900.08.9856222
CACGCCT692000.08.2028275
TCACGCC672600.08.0235364
ACGCCTG670950.07.9091676
CGCCTGT737000.07.4954367
ACCGCAC176250.07.27656171
GCGATCT218200.07.1139164
GGCGCGA130950.07.05151371
GGCTCAC1621550.06.6255351
CGTCGTG376150.06.4383187145
CGCAATC109000.06.32139973
AGCGTCG413200.06.317268145
CCTGTAA1916750.06.18392669
GATCGGA645900.06.0395427145
GCTCACA775000.05.8774272
Produced by FastQC (version 0.11.5)