FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754086

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754086
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57081537
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCTCACG522850.010.2494662
CTCACGC516850.010.08453753
GCGTCGG52050.09.74937145
CGCGATC102200.09.1501973
GCGCGAT102450.08.8477332
ACCGCGC171550.08.2883611
CACGCCT698600.08.083525
ACGCCTG682300.07.9791426
TCACGCC671350.07.9689114
CGCCTGT734100.07.7717017
GGCGCGA131200.07.3739091
ACCGCAC169000.06.9389051
GCGATCT215500.06.7950984
AGCGTCG414350.06.6483746145
CGCAATC109150.06.64152573
GGCTCAC1639900.06.52518941
AACGCGA32902.910383E-116.46040531
CGTCGTG378100.06.4038186145
CCTGTAA1935950.06.38824949
GCGCAAT107100.06.36461732
Produced by FastQC (version 0.11.5)