FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754094

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754094
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54867853
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCACGC487350.010.6067243
GCTCACG497000.010.4748422
CGCGATC101750.010.1178123
GCGCGAT103100.09.7754232
ACCGCGC161500.08.6912791
GCGTCGG53550.08.666044145
CACGCCT653200.08.4340395
TCACGCC632300.08.368994
ACGCCTG641550.08.2144356
CGCCTGT688350.08.1087517
GGCGCGA128500.08.0065931
GCGATCT209300.08.0004814
ACCGCAC166900.06.82493071
GGCTCAC1563550.06.39689451
TGCGATC125200.06.3118243
CCTGTAA1830150.06.22649969
CGATCTC351850.06.2218225
AGATCGG635600.05.9208474145
CGCAATC102950.05.91542053
GATCGGA598450.05.9006724145
Produced by FastQC (version 0.11.5)