FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005754117

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754117
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50802083
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC456200.06.091992145
ACGTCTG459650.06.046267145
CGGAAGA684150.06.0031743145
TCGGAAG693550.05.83811145
GATCGGA703350.05.7980323145
AGATCGG736150.05.7171226145
ATCGGAA698650.05.629314145
CGTCTGA408000.05.600299140-144
TAGATCG272700.05.5613084145
CACGTCT498350.05.5330544145
ATCGCGT15800.0087135175.5111217145
GCACACG585200.05.307076145
CGTATGC107100.05.0814495145
CAGATCG212050.05.0645313145
Produced by FastQC (version 0.11.5)