FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754122

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754122
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49944240
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG48150.010.389313145
CGTCGTG418700.06.268153145
CGTGTAG419600.06.0819263145
GTCGTGT432850.05.929251145
GCGTCGT425650.05.872292140-144
GAGCGTC521100.05.8711796145
AGCGTCG460550.05.6356006145
ATCGGAA705700.05.5373583145
TCGTGTA410650.05.525944145
AGATCGG744800.05.470546145
GATCGGA708600.05.4635396145
AAGAGCG647800.05.461512145
TCGGAAG703800.05.335984145
AGAGCGT575450.05.127679145
CGGAAGA702550.05.035894145
Produced by FastQC (version 0.11.5)