FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005754123

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754123
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49025403
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA660350.06.197999145
ACACGTC430200.06.0895247145
GCACACG555200.05.973286145
TCGGAAG650100.05.860379145
GATCGGA664800.05.752627145
CGTCTGA385150.05.7278323145
AGATCGG691750.05.5180187145
TAGATCG262900.05.46539145
CACGTCT468900.05.35479145
CGGAAGA645800.05.292605145
ACGTCTG431650.05.1612306145
CACACGT546000.05.156864145
Produced by FastQC (version 0.11.5)