FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754130

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754130
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57983368
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG64550.014.265712145
ACCGCGC163850.08.1379841
CGCGATC102250.07.30649383
GCGCGAT102650.07.0662182
CTCACGC498200.06.6243433
GCTCACG513250.06.58571532
CGTCGTG473100.06.482961145
CGTGTAG472150.05.9738674145
GCGTCGT478150.05.9372487140-144
GGCGCGA131000.05.8723221
GATCGGA824850.05.7489533145
AGATCGG863050.05.7381344145
AGCGTCG521550.05.7277927145
TCGGAAG813400.05.705081145
GTCGTGT482650.05.6636324145
GAGCGTC591850.05.6354966145
TCGTGTA459000.05.560527145
ACGCCTG645700.05.50150166
TAGATCG315650.05.4900727145
CACGCCT662700.05.45880655
Produced by FastQC (version 0.11.5)