FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754136

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754136
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57574818
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG54950.08.839045145
ACCGCGC166400.07.3618081
GCGCGAT101950.07.11246822
CGCGATC101850.06.9752753
CGTCGTG476800.06.902681145
AGCGTCG528950.06.3180704145
GCTCACG506700.06.19647262
TCGTGTA460950.06.1335087145
CTCACGC495500.06.1300873
GTCGTGT488000.06.046064145
GGCGCGA129400.06.00887161
GATCGGA817600.06.0026903145
AGATCGG864100.05.9984665145
GCGTCGT489850.05.9344363145
GAGCGTC601750.05.854885145
ATCGGAA810750.05.838811145
CGGAAGA813450.05.4451337145
GCGATCT211100.05.42581754
AAGAGCG746100.05.411982145
TCGGAAG806000.05.333568145
Produced by FastQC (version 0.11.5)