FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754138

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754138
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56290440
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG52500.010.633036145
GCGCGAT97200.07.90830042
CGCGATC95600.07.81049543
ACCGCGC161100.07.0168731
AGCGTCG501300.06.7103643145
CGTCGTG451250.06.538875145
GGCGCGA124150.06.50375751
CTCACGC483800.06.41323473
GCTCACG493500.06.28926852
AGATCGG826650.06.121525145
GAGCGTC572750.05.999832145
TCGTGTA445050.05.962085145
CGTGTAG452950.05.954133145
GCGTCGT462800.05.9460077140-144
AAGAGCG717250.05.8827214145
GTCGTGT463100.05.870598145
GATCGGA776900.05.8136487145
GCGATCT201650.05.7518444
TAGATCG303200.05.714715145
CGCCGTA97750.05.6366706145
Produced by FastQC (version 0.11.5)