FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754142

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754142
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55344953
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG52000.09.481162145
CGCGATC98300.08.0391363
GCGCGAT98800.07.6325232
ACCGCGC153050.07.34477041
CTCACGC473700.06.9790753
GCTCACG487000.06.87867452
AGCGTCG480600.06.698156145
GAGCGTC552700.06.4278045145
CGTCGTG436600.06.2605667145
GGCGCGA127000.06.07443241
GTCGTGT448200.05.9853145
ATCGGAA749250.05.9802284145
AGATCGG801450.05.96163145
GCGATCT203600.05.91021874
TCGTGTA428400.05.906524145
GCGTCGT444650.05.8073140-144
CGTGTAG435250.05.663647145
GATCGGA757450.05.6379145
AAGAGCG686900.05.62587145
TCGGAAG745900.05.5793977145
Produced by FastQC (version 0.11.5)