FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754147

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754147
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences374029685
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1565300.027.04381
TCGGAAG1664950.025.5046922
CGGAAGA1882550.022.5566623
AGAGCAC4000500.011.1233557
TATGCCG832400.010.93036445-49
AGCACAC4271650.010.5021489
GAGCACA4371600.010.2421248
GAAGAGC4454000.010.0965865
CTCGTAT913300.010.09233640-44
CGTATGC954600.09.52963145-49
TCGTATC799800.09.50679835-39
TCTCGTA819300.09.45396340-44
TATCTCG871250.08.79372840-44
ATGCCGT1026600.08.68190345-49
GCCGTCT1025050.08.40505550-54
TGCCGTC1008650.08.32608945-49
GTCACGA1116700.08.29303525-29
ATTCGTA1110100.08.27180735-39
ATCTCGT1006350.07.850923540-44
TCGTATG1128050.07.80084740-44
Produced by FastQC (version 0.11.5)