FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754155

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754155
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences420559810
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATCGCG231050.013.70598420-24
TGGCCCG885250.012.9738725
ATCGCGG293600.010.90928920-24
CCGGGGG1320800.08.8051649
GGCCCGG1372250.08.6648886
TCGCGGC389250.08.41083920-24
GCCCGGG1581800.07.60392957
CCCGGGG1599350.07.58836468
GTATGGC1752300.07.21511172
GATCCGT406700.06.7980181
TTCGCGA129200.06.157214630-34
ATCGGAA905550.05.73858931
GGATCCG440550.05.7166644
TATGGCC2445000.05.452173
GTACTGG2439950.05.29481031
ATGGCCC2493100.05.2221594
TCGCGAT112950.05.182861330-34
TCGGAAG1020550.05.1553572
GTTCGCG149550.05.05776430-34
Produced by FastQC (version 0.11.5)