FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754156

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754156
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences420559810
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATCGCG233500.012.48642920-24
TGGCCCG967700.011.5088295
ATCGCGG381100.07.81782520-24
GATCCGT427200.07.7947191
GGCCCGG1645400.07.01523646
TCGCGGC444850.06.909320420-24
GTATGGC1738200.06.88091332
GCCCGGG1873550.06.3118087
CCGGGGG1833300.06.04422439
CCCGGGG1905850.06.0346128
GGATCCG472300.05.46109724
TATGGCC2345800.05.4510843
ATGGCCC2426600.05.216064
GTACTGG2446750.05.0968911
TTCGCGA165100.05.067977430-34
Produced by FastQC (version 0.11.5)