FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005754159

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005754159
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences377386530
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA886900.014.7135561
TCGGAAG973500.013.3079192
TATCGCG169250.013.04130320-24
CGGAAGA1174950.011.16805653
TGGCCCG773600.011.0224295
ATCGCGG230200.09.74575220-24
GGCCCGG1162400.07.6472686
TCGCGGC312450.07.46320320-24
CCGGGGG1157800.07.4273659
GCCCGGG1351500.06.7380867
CCCGGGG1375500.06.5099178
GATCCGT360900.06.20369051
GTATGGC1549950.06.16603042
TATGCCG478450.05.839203445-49
CTCGTAT574100.05.356351440-44
TTCGCGA112700.05.28679930-34
TCGCGAT99800.05.069553430-34
Produced by FastQC (version 0.11.5)